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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802882.1_cds_XP_016481682.1_7269
CDS Infomation

[gene=LOC107802654] [db_xref=GeneID:107802654] [protein=uncharacterized membrane protein At3g27390-like isoform X2] [protein_id=XP_016481682.1] [location=join(125460..125553,127162..127270,127363..127396,127649..127785,128855..129143,129241..129347,129456..129591,129684..129882,129972..130215,130304..130571)] [gbkey=CDS]
Sequence

ATGGAACCCCCAAGGGGGTTTCTGGCTTCTTTGTGGAACTTCATCTGTTTCTTGCCTTAC
TTCATTGGCCTGCTTATTCTCGGTGTTTTGAAAGGTGTCATTTTGTGCCCATTGATCCTC
GTTATAGTCACTGTCGGAAACTCTGCCCTTATTTTGGGTCTTTGGCCTGTGCACCTGTTC
TATACGTATTACTGTCTATGGAGCTCAAAGCAATTAGGTCCAGCTTTAAAACTTGTGGAT
GGGACTTGGGACACGGTGAAAGGAAGCTTTACTATTGTTAGGGATGTGAGGGATGTTTTA
TACCATTCCTACTTCTCGATCATGGATGATTTGCGACTTCAAGGACCTCCTGGTGGAAAA
TACTATGAGATCAGGTTGCTTTATATACCTTTGGCGCTAGTAGCCGTAGCACTAGGACTC
CTGGTTGACATACCGACGATCACAGTAATTGCTGCTTGCAAATTTCCTTACATGCTTTTG
AAGGGGTGGCGTCGCTTGTTTCATGATTGTATAGGTCGAGAAGGACCTTTTCTAGAGACC
ATCTGTGTGCCATTTGCTGGTCTTGCTATCTTACTCTGGCCAATGGCTGTTGTTGGGGCA
TTCATTGGATCAATGTTAGCAAGTATCCTCCTCGGTGCTTATTCAGGAGTAGTTGTATAT
CAGGAGTCTTCTCTTTGGTTGGGGCTTTGCTATATCGTTGCTTCCTTGTCCATATATGAT
GAATATAGCAATGATGTGCTAGATATGCCAGAAGGATCCTGCTTTCCTAGGCCTCGGTAC
AGAAAGAAGACTGCATCAAGAACCAGCTCTCGTTCAGCTTCTTTCTCAAGGCCTGAATCT
TTCAAAAATCCACCATCTCGTACGAACTCCATCAATGCTCCCATGGTCGAGTTGAAGCCC
CTCGAGCTTCTTGATGGCTTATTCACGGGCTGTCAATATCATGGGGAAATCATGGTATCT
AAAGGAGTAATTACACAAAAAGACATTGAAGATGCCAAGTCTAATAGAGATAGTGGTCAA
GTCATTAGCATTGGTTTGCCTGCCTATTGCATCCTTCAGACCCTTATACGTTCTGCCAAA
GCCAACAGCGCTGGTCTTTTGATAAACGACGATGGTACCGAAGTAACCAGCACAAACAGG
CCCAGAGATACATTCTATGAGTGGTTTCTCAATCCACTCTTGATCATCAAAGACCAGATC
AAAGCTGAAAATATTTCCGACAGCGAAGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGT
GGTGATCCTGAGAGGTTGAGGAATTCAAATATTGGATCACCACCTGAATCTGATCTGAGG
CGAGCTGAGTTTGAGGCGTTAGCTCGAAGACTACGAGGCATCACAAAATCTATATCAAGA
TATCCAACATTCAGGCGCCGCTTTGAGAGTAGCATCAGGATTATCTTAGAAGAACTAGCC
AAGAAGAACGGTGATGGTAGAAAATCAGAAGATTCAGGACCTCAAAAAGTTCCCAGGTCA
AAAAGCATGTTTGTTCGCATGTTTAGCGATAAATCTTTCAAGAACAGAAATGGAAACAAT
GGATATGATCAAGAGGCTCAACTGGTAGATGCTTACAGAAATGTTGAAATCCAATGA

Peptide Sequence

PEP ID

XP_016481682.1
PEP Infomation

PREDICTED: uncharacterized membrane protein At3g27390-like isoform X2 [Nicotiana tabacum]
Sequence

MEPPRGFLASLWNFICFLPYFIGLLILGVLKGVILCPLILVIVTVGNSALILGLWPVHLF
YTYYCLWSSKQLGPALKLVDGTWDTVKGSFTIVRDVRDVLYHSYFSIMDDLRLQGPPGGK
YYEIRLLYIPLALVAVALGLLVDIPTITVIAACKFPYMLLKGWRRLFHDCIGREGPFLET
ICVPFAGLAILLWPMAVVGAFIGSMLASILLGAYSGVVVYQESSLWLGLCYIVASLSIYD
EYSNDVLDMPEGSCFPRPRYRKKTASRTSSRSASFSRPESFKNPPSRTNSINAPMVELKP
LELLDGLFTGCQYHGEIMVSKGVITQKDIEDAKSNRDSGQVISIGLPAYCILQTLIRSAK
ANSAGLLINDDGTEVTSTNRPRDTFYEWFLNPLLIIKDQIKAENISDSEEEYLGKLVLLS
GDPERLRNSNIGSPPESDLRRAEFEALARRLRGITKSISRYPTFRRRFESSIRIILEELA
KKNGDGRKSEDSGPQKVPRSKSMFVRMFSDKSFKNRNGNNGYDQEAQLVDAYRNVEIQ

Transcript Sequence

Gene sequence data has not been registered.